HomoloGene

HomoloGene, a tool of the National Center for Biotechnology Information (NCBI), is a system for automated detection of homologs (similarity attributable to descent from a common ancestor) among the annotated genes of several completely sequenced eukaryotic genomes. The HomoloGene processing consists of the protein analysis from the input organisms. Sequences are compared using blastp, then matched up and put into groups, using a taxonomic tree built from sequence similarity, where closer related organisms are matched up first, and then further organisms are added to the tree.

Links to bio2rdf-gene: 244378 Links to bio2rdf-symbol: 244378

Resources

SPARQL endpoint    api/sparql

SPARQL endpoint

http://homologene.bio2rdf.org/sparql [downloaded 4 times]

Example ressource (rdf)    example/rdf+xml

Example ressource (rdf)

http://bio2rdf.org/rdfxml/homologene:813 [downloaded 6 times]

Additional Information

Field Value
Source http://homologene.bio2rdf.org
Author Bio2RDF
Maintainer Maintainer not given
links:bio2rdf-geneid 244378
namespace http://bio2rdf.org/
triples 6598206